SNP Detail For rs118009632
1.Mapping Information
Human SNP ID rs118009632
Human chromosome chr12
Human SNP position 54565888
Pig chromosome chr5
Pig SNP position 20600639
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1 in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region12q13.2
Chromosome idchr12
Chromosome position54565888
Reported genePDE1B
Mapped genePDE1B
Upstream gene id
Downstream gene id
SNP gene ids5153
Upstream gene distance
Downstream gene distance
SNP risk allelers118009632-T
SNPsrs118009632
Merged0
SNP id current118009632
Contextintron_variant
Intergenic0
Allele frequency0.015
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.212
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST003263