Human SNP ID | rs11799420 |
---|---|
Human chromosome | chr1 |
Human SNP position | 171683838 |
Pig chromosome | chr1 |
Pig SNP position | 182227840 |
PubMed ID | 25625606 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25625606 |
Study | Investigating the Genetics of Hippocampal Volume in Older Adults without Dementia. |
Disease/Trait | Hippocampal atrophy |
Initial sample | 325 European ancestry older adult individuals |
Replication sample | NA |
Region | 1q24.3 |
Chromosome id | chr1 |
Chromosome position | 171683838 |
Reported gene | VAMP4 |
Mapped gene | RPL4P3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 391135 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11799420-? |
SNPs | rs11799420 |
Merged | 0 |
SNP id current | 11799420 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [at least 734550] (imputed) |
CNV | N |
Mapped trait | hippocampal atrophy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005039 |
Study accession | GCST002760 |