SNP Detail For rs11775199
1.Mapping Information
Human SNP ID rs11775199
Human chromosome chr8
Human SNP position 128268703
Pig chromosome chr4
Pig SNP position 12303907
2.Annotation Information
PubMed ID23934736
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/23934736
StudyGenome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
Disease/TraitMetabolite levels (Dihydroxy docosatrienoic acid)
Initial sample1,260 African American individuals
Replication sampleNA
Region8q24.21
Chromosome idchr8
Chromosome position128268703
Reported genePVT1
Mapped geneLOC105375755 - LINC00824
Upstream gene id105375755
Downstream gene id101927774
SNP gene ids
Upstream gene distance81957
Downstream gene distance136566
SNP risk allelers11775199-A
SNPsrs11775199
Merged0
SNP id current11775199
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta0.11
%95 Ci[0.06-0.16] unit decrease
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitdihydroxy docosatrienoic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005275
Study accessionGCST002120