Human SNP ID | rs11775199 |
---|---|
Human chromosome | chr8 |
Human SNP position | 128268703 |
Pig chromosome | chr4 |
Pig SNP position | 12303907 |
PubMed ID | 23934736 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/23934736 |
Study | Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study. |
Disease/Trait | Metabolite levels (Dihydroxy docosatrienoic acid) |
Initial sample | 1,260 African American individuals |
Replication sample | NA |
Region | 8q24.21 |
Chromosome id | chr8 |
Chromosome position | 128268703 |
Reported gene | PVT1 |
Mapped gene | LOC105375755 - LINC00824 |
Upstream gene id | 105375755 |
Downstream gene id | 101927774 |
SNP gene ids | |
Upstream gene distance | 81957 |
Downstream gene distance | 136566 |
SNP risk allele | rs11775199-A |
SNPs | rs11775199 |
Merged | 0 |
SNP id current | 11775199 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 0.11 |
%95 Ci | [0.06-0.16] unit decrease |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | dihydroxy docosatrienoic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005275 |
Study accession | GCST002120 |