Human SNP ID | rs11773845 |
---|---|
Human chromosome | chr7 |
Human SNP position | 116551247 |
Pig chromosome | chr18 |
Pig SNP position | 31755579 |
PubMed ID | 23139255 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23139255 |
Study | Novel loci associated with PR interval in a genome-wide association study of 10 African American cohorts. |
Disease/Trait | PR interval |
Initial sample | 13,415 African American individuals |
Replication sample | NA |
Region | 7q31.2 |
Chromosome id | chr7 |
Chromosome position | 116551247 |
Reported gene | CAV1 |
Mapped gene | CAV1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 857 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11773845-A |
SNPs | rs11773845 |
Merged | 0 |
SNP id current | 11773845 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.36 |
P value | 0.000000000004 |
Pvalue mlog | 11.397940008672 |
P value text | |
Or beta | 2.29 |
%95 Ci | [1.64-2.94] unit decrease |
Platform | Affymetrix, Illumina [2845108] (imputed) |
CNV | N |
Mapped trait | PR interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004462 |
Study accession | GCST001735 |
PubMed ID | 25035420 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25035420 |
Study | Identification of three novel genetic variations associated with electrocardiographic traits (QRS duration and PR interval) in East Asians. |
Disease/Trait | PR interval |
Initial sample | 6,085 Korean ancestry individuals |
Replication sample | 7,295 Japanese ancestry individuals |
Region | 7q31.2 |
Chromosome id | chr7 |
Chromosome position | 116551247 |
Reported gene | CAV1, CAV2 |
Mapped gene | CAV1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 857 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11773845-C |
SNPs | rs11773845 |
Merged | 0 |
SNP id current | 11773845 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.34 |
P value | 0.00000000000003 |
Pvalue mlog | 13.5228787452803 |
P value text | |
Or beta | 3.21 |
%95 Ci | [2.39-4.03] unit increase |
Platform | Affymetrix [2100000] (imputed) |
CNV | N |
Mapped trait | PR interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004462 |
Study accession | GCST002535 |