Human SNP ID | rs11770772 |
---|---|
Human chromosome | chr7 |
Human SNP position | 22147462 |
Pig chromosome | chr9 |
Pig SNP position | 100435599 |
PubMed ID | 26265699 |
---|---|
Journal | Blood |
Link | www.ncbi.nlm.nih.gov/pubmed/26265699 |
Study | Genetics of glucocorticoid-associated osteonecrosis in children with acute lymphoblastic leukemia. |
Disease/Trait | Glucocorticoid-induced osteonecrosis (age 10 years and older) |
Initial sample | 230 osteonecrosis cases, 1,238 treated controls |
Replication sample | NA |
Region | 7p15.3 |
Chromosome id | chr7 |
Chromosome position | 22147462 |
Reported gene | RAPGEF5 |
Mapped gene | RAPGEF5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9771 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11770772-? |
SNPs | rs11770772 |
Merged | |
SNP id current | 11770772 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | response to glucocorticoid, osteonecrosis |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0051384, http://www.ebi.ac.uk/efo/EFO_0004259 |
Study accession | GCST003081 |