SNP Detail For rs11761231
1.Mapping Information
Human SNP ID rs11761231
Human chromosome chr7
Human SNP position 131685280
Pig chromosome chr18
Pig SNP position 18426027
2.Annotation Information
PubMed ID17554300
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/17554300
StudyGenome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
Disease/TraitRheumatoid arthritis
Initial sample1,860 European ancestry cases, 2,938 European ancestry controls
Replication sampleNA
Region7q32.3
Chromosome idchr7
Chromosome position131685280
Reported geneintergenic
Mapped geneRPS14P10 - RPS15AP22
Upstream gene id647034
Downstream gene id100271557
SNP gene ids
Upstream gene distance19372
Downstream gene distance16944
SNP risk allelers11761231-G
SNPsrs11761231
Merged0
SNP id current11761231
Contextintergenic_variant
Intergenic1
Allele frequency0.62
P value0.0000004
Pvalue mlog6.39794000867203
P value text(sex-differentiated)
Or beta1.44
%95 Ci[1.19-1.75]
PlatformAffymetrix [469557]
CNVN
Mapped traitrheumatoid arthritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000685
Study accessionGCST000040