SNP Detail For rs11738335
1.Mapping Information
Human SNP ID rs11738335
Human chromosome chr5
Human SNP position 61654384
Pig chromosome chr16
Pig SNP position 43432895
2.Annotation Information
PubMed ID22832961
JournalTransl Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22832961
StudyGenome-wide association study of Alzheimer__s disease.
Disease/TraitAlzheimer__s disease
Initial sample1,291 European ancestry cases, 938 European ancestry controls
Replication sample509 European ancestry cases, 753 European ancestry controls, 2,218 cases, 2,583 controls
Region5q12.1
Chromosome idchr5
Chromosome position61654384
Reported geneFLJ37543
Mapped geneC5orf64
Upstream gene id
Downstream gene id
SNP gene ids285668
Upstream gene distance
Downstream gene distance
SNP risk allelers11738335-?
SNPsrs11738335
Merged0
SNP id current11738335
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.2
%95 Ci[NR]
PlatformIllumina [2543888] (imputed)
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001529