SNP Detail For rs117375698
1.Mapping Information
Human SNP ID rs117375698
Human chromosome chr7
Human SNP position 68250721
Pig chromosome chr3
Pig SNP position 12246555
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region7q11.22
Chromosome idchr7
Chromosome position68250721
Reported geneIntergenic
Mapped geneLOC105375341
Upstream gene id
Downstream gene id
SNP gene ids105375341
Upstream gene distance
Downstream gene distance
SNP risk allelers117375698-T
SNPsrs117375698
Merged0
SNP id current117375698
Contextintron_variant
Intergenic0
Allele frequency0.999
P value0.0000003
Pvalue mlog6.52287874528033
P value text(AA)
Or beta0.397
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264