SNP Detail For rs117358016
1.Mapping Information
Human SNP ID rs117358016
Human chromosome chr13
Human SNP position 96514229
Pig chromosome chr11
Pig SNP position 72908982
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region13q32.1
Chromosome idchr13
Chromosome position96514229
Reported geneNR
Mapped geneHS6ST3
Upstream gene id
Downstream gene id
SNP gene ids266722
Upstream gene distance
Downstream gene distance
SNP risk allelers117358016-A
SNPsrs117358016
Merged
SNP id current117358016
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.16
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048