Human SNP ID | rs117167774 |
---|---|
Human chromosome | chr14 |
Human SNP position | 48354682 |
Pig chromosome | chr1 |
Pig SNP position | 198688971 |
PubMed ID | 26030696 |
---|---|
Journal | Am J Respir Crit Care Med |
Link | www.ncbi.nlm.nih.gov/pubmed/26030696 |
Study | A Genome-wide Association Study of Emphysema and Airway Quantitative Imaging Phenotypes. |
Disease/Trait | Emphysema imaging phenotypes |
Initial sample | 5,385 European ancestry chronic obstructive pulmonary disease cases, 901 African American chronic obstructive pulmonary disease cases, 3,613 European ancestry controls, 2,132 African American controls |
Replication sample | NA |
Region | 14q21.3 |
Chromosome id | chr14 |
Chromosome position | 48354682 |
Reported gene | LOC100506433 |
Mapped gene | LOC105370482 - LOC105370483 |
Upstream gene id | 105370482 |
Downstream gene id | 105370483 |
SNP gene ids | |
Upstream gene distance | 101529 |
Downstream gene distance | 45729 |
SNP risk allele | rs117167774-T |
SNPs | rs117167774 |
Merged | |
SNP id current | 117167774 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (%LAA-950, All) |
Or beta | 0.47 |
%95 Ci | [0.019-0.921] unit increase |
Platform | Illumina [7600000] (imputed) |
CNV | N |
Mapped trait | emphysema imaging measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007626 |
Study accession | GCST002945 |