SNP Detail For rs117041046
1.Mapping Information
Human SNP ID rs117041046
Human chromosome chr20
Human SNP position 58907185
Pig chromosome chr17
Pig SNP position 66419428
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region20q13.32
Chromosome idchr20
Chromosome position58907185
Reported geneGNAS
Mapped geneGNAS
Upstream gene id
Downstream gene id
SNP gene ids2778
Upstream gene distance
Downstream gene distance
SNP risk allelers117041046-C
SNPsrs117041046
Merged0
SNP id current117041046
Contextintron_variant
Intergenic0
Allele frequency0.999
P value0.0000009
Pvalue mlog6.04575749056067
P value text(AA)
Or beta0.309
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264