SNP Detail For rs11696277
1.Mapping Information
Human SNP ID rs11696277
Human chromosome chr20
Human SNP position 17283959
Pig chromosome chr17
Pig SNP position 29146704
2.Annotation Information
PubMed ID26528553
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26528553
StudyGenome-Wide Association Studies of the Human Gut Microbiota.
Disease/TraitGut microbiome composition (summer)
Initial sample91 Hutterite individuals
Replication sampleNA
Region20p12.1
Chromosome idchr20
Chromosome position17283959
Reported geneNR
Mapped genePCSK2, LOC105372546
Upstream gene id
Downstream gene id
SNP gene ids5126, 105372546
Upstream gene distance
Downstream gene distance
SNP risk allelers11696277-?
SNPsrs11696277
Merged0
SNP id current11696277
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text(genus_Anaerotruncus)
Or beta0.792154
%95 Ci[0.49-1.1] unit increase
PlatformAffymetrix [210924]
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003221