Human SNP ID | rs11696277 |
---|---|
Human chromosome | chr20 |
Human SNP position | 17283959 |
Pig chromosome | chr17 |
Pig SNP position | 29146704 |
PubMed ID | 26528553 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26528553 |
Study | Genome-Wide Association Studies of the Human Gut Microbiota. |
Disease/Trait | Gut microbiome composition (summer) |
Initial sample | 91 Hutterite individuals |
Replication sample | NA |
Region | 20p12.1 |
Chromosome id | chr20 |
Chromosome position | 17283959 |
Reported gene | NR |
Mapped gene | PCSK2, LOC105372546 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5126, 105372546 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11696277-? |
SNPs | rs11696277 |
Merged | 0 |
SNP id current | 11696277 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (genus_Anaerotruncus) |
Or beta | 0.792154 |
%95 Ci | [0.49-1.1] unit increase |
Platform | Affymetrix [210924] |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003221 |