Human SNP ID | rs116909374 |
---|---|
Human chromosome | chr14 |
Human SNP position | 36269155 |
Pig chromosome | chr7 |
Pig SNP position | 68625633 |
PubMed ID | 22267200 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22267200 |
Study | Discovery of common variants associated with low TSH levels and thyroid cancer risk. |
Disease/Trait | Thyroid cancer |
Initial sample | 27,758 European ancestry individuals |
Replication sample | 1,156 European ancestry cases, up to 42,617 European ancestry controls |
Region | 14q13.3 |
Chromosome id | chr14 |
Chromosome position | 36269155 |
Reported gene | MBIP |
Mapped gene | LOC101927199 - LOC102723418 |
Upstream gene id | 101927199 |
Downstream gene id | 102723418 |
SNP gene ids | |
Upstream gene distance | 33793 |
Downstream gene distance | 4165 |
SNP risk allele | rs116909374-T |
SNPs | rs116909374 |
Merged | 0 |
SNP id current | 116909374 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.017 |
P value | 0.00000000005 |
Pvalue mlog | 10.3010299956639 |
P value text | |
Or beta | 2.09 |
%95 Ci | [1.68-2.60] |
Platform | Illumina [~ 16000000] (imputed) |
CNV | N |
Mapped trait | thyroid carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002892 |
Study accession | GCST001382 |