Human SNP ID | rs116896199 |
---|---|
Human chromosome | chr20 |
Human SNP position | 61531817 |
Pig chromosome | chr17 |
Pig SNP position | 68659604 |
PubMed ID | 24322204 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/24322204 |
Study | Genome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2. |
Disease/Trait | Bipolar disorder (body mass index interaction) |
Initial sample | 388 European ancestry cases, 1,020 European ancestry controls |
Replication sample | NA |
Region | 20q13.33 |
Chromosome id | chr20 |
Chromosome position | 61531817 |
Reported gene | NR |
Mapped gene | CDH4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1002 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs116896199-? |
SNPs | rs116896199 |
Merged | 0 |
SNP id current | 116896199 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | |
%95 Ci | |
Platform | NR [up to 8466825] (imputed) |
CNV | N |
Mapped trait | bipolar disorder, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002306 |