SNP Detail For rs116896199
1.Mapping Information
Human SNP ID rs116896199
Human chromosome chr20
Human SNP position 61531817
Pig chromosome chr17
Pig SNP position 68659604
2.Annotation Information
PubMed ID24322204
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24322204
StudyGenome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
Disease/TraitBipolar disorder (body mass index interaction)
Initial sample388 European ancestry cases, 1,020 European ancestry controls
Replication sampleNA
Region20q13.33
Chromosome idchr20
Chromosome position61531817
Reported geneNR
Mapped geneCDH4
Upstream gene id
Downstream gene id
SNP gene ids1002
Upstream gene distance
Downstream gene distance
SNP risk allelers116896199-?
SNPsrs116896199
Merged0
SNP id current116896199
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta
%95 Ci
PlatformNR [up to 8466825] (imputed)
CNVN
Mapped traitbipolar disorder, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002306