SNP Detail For rs116837984
1.Mapping Information
Human SNP ID rs116837984
Human chromosome chr3
Human SNP position 41353856
Pig chromosome chr13
Pig SNP position 27768020
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3p22.1
Chromosome idchr3
Chromosome position41353856
Reported geneULK4
Mapped geneULK4
Upstream gene id
Downstream gene id
SNP gene ids54986
Upstream gene distance
Downstream gene distance
SNP risk allelers116837984-A
SNPsrs116837984
Merged0
SNP id current116837984
Contextintron_variant
Intergenic0
Allele frequency0.994
P value0.0000002
Pvalue mlog6.69897000433601
P value text(AA)
Or beta0.121
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264