SNP Detail For rs11683087
1.Mapping Information
Human SNP ID rs11683087
Human chromosome chr2
Human SNP position 226721890
Pig chromosome chr15
Pig SNP position 142163033
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region2q36.3
Chromosome idchr2
Chromosome position226721890
Reported geneLOC646736, IRS1
Mapped geneMIR5702 - IRS1
Upstream gene id100847053
Downstream gene id3667
SNP gene ids
Upstream gene distance63097
Downstream gene distance9427
SNP risk allelers11683087-?
SNPsrs11683087
Merged0
SNP id current11683087
Contextregulatory_region_variant
Intergenic1
Allele frequency
P value0.0000007
Pvalue mlog6.15490195998574
P value text(M)
Or beta20.54
%95 Ci[12.95-28.13] unit increase
PlatformIllumina [693128]
CNVN
Mapped traitinsulin sensitivity measurement, glucose homeostasis measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004471, http://www.ebi.ac.uk/efo/EFO_0006896
Study accessionGCST002726