SNP Detail For rs11680810
1.Mapping Information
Human SNP ID rs11680810
Human chromosome chr2
Human SNP position 24274027
Pig chromosome chr3
Pig SNP position 121709187
2.Annotation Information
PubMed ID25865494
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25865494
StudyGenome-wide Analysis of Body Proportion Classifies Height-Associated Variants by Mechanism of Action and Implicates Genes Important for Skeletal Development.
Disease/TraitSitting height ratio
Initial sample3,545 African Americans individuals, 12,965 European ancestry women, 8,625 European ancestry men
Replication sampleNA
Region2p23.3
Chromosome idchr2
Chromosome position24274027
Reported geneNR
Mapped geneITSN2
Upstream gene id
Downstream gene id
SNP gene ids50618
Upstream gene distance
Downstream gene distance
SNP risk allelers11680810-T
SNPsrs11680810
Merged0
SNP id current11680810
Contextintron_variant
Intergenic0
Allele frequency0.194
P value0.000005
Pvalue mlog5.30102999566398
P value text(EA, men)
Or beta0.099
%95 Ci[0.056-0.142] unit increase
PlatformAffymetrix, Illumina [up to 10250422] (imputed)
CNVN
Mapped traitsitting height ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007118
Study accessionGCST002843