SNP Detail For rs11680012
1.Mapping Information
Human SNP ID rs11680012
Human chromosome chr2
Human SNP position 237763782
Pig chromosome chr15
Pig SNP position 151833875
2.Annotation Information
PubMed ID23505185
JournalObesity (Silver Spring)
Linkwww.ncbi.nlm.nih.gov/pubmed/23505185
StudyA variant in the LRRFIP1 gene is associated with adiposity and inflammation.
Disease/TraitAdiposity
Initial sample928 French Canadian individuals
Replication sampleNA
Region2q37.3
Chromosome idchr2
Chromosome position237763782
Reported geneLRRFIP1
Mapped geneLRRFIP1
Upstream gene id
Downstream gene id
SNP gene ids9208
Upstream gene distance
Downstream gene distance
SNP risk allelers11680012-C
SNPsrs11680012
Merged0
SNP id current11680012
Contextmissense_variant
Intergenic0
Allele frequency0.05
P value0.000004
Pvalue mlog5.39794000867203
P value text(TAT)
Or beta0.581
%95 Ci[NR] cm2 increase
PlatformIllumina [543714]
CNVN
Mapped traitobesity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001073
Study accessionGCST001583