Human SNP ID | rs116766958 |
---|---|
Human chromosome | chr11 |
Human SNP position | 62579038 |
Pig chromosome | chr2 |
Pig SNP position | 8502986 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1 |
Initial sample | 10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals |
Replication sample | NA |
Region | 11q12.3 |
Chromosome id | chr11 |
Chromosome position | 62579038 |
Reported gene | TUT1 |
Mapped gene | TUT1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 64852 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs116766958-T |
SNPs | rs116766958 |
Merged | 0 |
SNP id current | 116766958 |
Context | splice_region_variant |
Intergenic | 0 |
Allele frequency | 0.978 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (AA) |
Or beta | 0.266 |
%95 Ci | NR unit increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | forced expiratory volume, response to bronchodilator |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366 |
Study accession | GCST003262 |