SNP Detail For rs11669133
1.Mapping Information
Human SNP ID rs11669133
Human chromosome chr19
Human SNP position 10981463
Pig chromosome chr2
Pig SNP position 70162570
2.Annotation Information
PubMed ID21347282
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21347282
StudyGenome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project.
Disease/TraitLDL cholesterol
Initial sample7,565 African American individuals
Replication sample3,789 African American and Afro-Caribbean individuals
Region19p13.2
Chromosome idchr19
Chromosome position10981463
Reported geneSMARCA4
Mapped geneSMARCA4
Upstream gene id
Downstream gene id
SNP gene ids6597
Upstream gene distance
Downstream gene distance
SNP risk allelers11669133-A
SNPsrs11669133
Merged0
SNP id current11669133
Contextintron_variant
Intergenic0
Allele frequency0.06
P value0.00000001
Pvalue mlog8
P value text
Or beta0.1671
%95 Ci[0.11-0.22] unit decrease
PlatformAffymetrix [~ 2740000] (imputed)
CNVN
Mapped traitlow density lipoprotein cholesterol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004611
Study accessionGCST000975