Human SNP ID | rs11668609 |
---|---|
Human chromosome | chr19 |
Human SNP position | 24172691 |
Pig chromosome | chr7 |
Pig SNP position | 4532469 |
PubMed ID | 23006423 |
---|---|
Journal | BMC Cancer |
Link | www.ncbi.nlm.nih.gov/pubmed/23006423 |
Study | Genetic association with overall survival of taxane-treated lung cancer patients - A genome-wide association study in human lymphoblastoid cell lines followed by a clinical association study. |
Disease/Trait | Response to taxane treatment (docetaxel) |
Initial sample | 96 African American lymphoblastoid cell lines, 96 European ancestry lymphoblastoid cell lines, 96 Han Chinese ancestry lymphoblastoid cell lines |
Replication sample | NA |
Region | 19p12 |
Chromosome id | chr19 |
Chromosome position | 24172691 |
Reported gene | ZNF254 |
Mapped gene | HAVCR1P1 - LOC105376906 |
Upstream gene id | 100101266 |
Downstream gene id | 105376906 |
SNP gene ids | |
Upstream gene distance | 9244 |
Downstream gene distance | 3347413 |
SNP risk allele | rs11668609-? |
SNPs | rs11668609 |
Merged | 0 |
SNP id current | 11668609 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 1300000] |
CNV | N |
Mapped trait | response to antineoplastic agent |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097327 |
Study accession | GCST001692 |