SNP Detail For rs11661542
1.Mapping Information
Human SNP ID rs11661542
Human chromosome chr18
Human SNP position 22643732
Pig chromosome chr6
Pig SNP position 100247533
2.Annotation Information
PubMed ID20364137
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20364137
StudyGenome-wide association study of intracranial aneurysm identifies three new risk loci.
Disease/TraitIntracranial aneurysm
Initial sample2,780 European ancestry cases, 12,515 European ancestry controls
Replication sample3,111 Japanese ancestry cases, 1,666 Japanese ancestry controls
Region18q11.2
Chromosome idchr18
Chromosome position22643732
Reported geneRBBP8
Mapped geneLOC105372021 - LOC101927571
Upstream gene id105372021
Downstream gene id101927571
SNP gene ids
Upstream gene distance2731
Downstream gene distance79759
SNP risk allelers11661542-C
SNPsrs11661542
Merged0
SNP id current11661542
Contextupstream_gene_variant
Intergenic1
Allele frequency0.49
P value0.000000000001
Pvalue mlog12
P value text
Or beta1.22
%95 Ci[1.15-1.28]
PlatformIllumina [831534] (imputed)
CNVN
Mapped traitbrain aneurysm
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003870
Study accessionGCST000646