SNP Detail For rs11655237
1.Mapping Information
Human SNP ID rs11655237
Human chromosome chr17
Human SNP position 72404025
Pig chromosome chr12
Pig SNP position 8820133
2.Annotation Information
PubMed ID26098869
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26098869
StudyCommon variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer.
Disease/TraitPancreatic cancer
Initial sample7,638 cases, 7,364 controls
Replication sample2,287 cases, 4,205 controls
Region17q24.3
Chromosome idchr17
Chromosome position72404025
Reported geneLINC00673
Mapped geneLINC00673
Upstream gene id
Downstream gene id
SNP gene ids100499467
Upstream gene distance
Downstream gene distance
SNP risk allelers11655237-T
SNPsrs11655237
Merged
SNP id current11655237
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.11
P value0.00000000000001
Pvalue mlog14
P value text
Or beta1.26
%95 Ci[1.19-1.34]
PlatformIllumina [866891] (imputed)
CNVN
Mapped traitpancreatic carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002618
Study accessionGCST002991