SNP Detail For rs11654699
1.Mapping Information
Human SNP ID rs11654699
Human chromosome chr17
Human SNP position 32576292
Pig chromosome chr12
Pig SNP position 44159310
2.Annotation Information
PubMed ID25188341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25188341
StudyGenome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias.
Disease/TraitNeurofibrillary tangles
Initial sampleup to 4,707 individuals
Replication sampleNA
Region17q11.2
Chromosome idchr17
Chromosome position32576292
Reported geneMYO1D
Mapped geneMYO1D
Upstream gene id
Downstream gene id
SNP gene ids4642
Upstream gene distance
Downstream gene distance
SNP risk allelers11654699-C
SNPsrs11654699
Merged0
SNP id current11654699
Contextintron_variant
Intergenic0
Allele frequency0.5243
P value0.000005
Pvalue mlog5.30102999566398
P value text(Ordinal II)
Or beta0.2055
%95 Ci[0.12-0.29] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitneurofibrilliary tangles measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006797
Study accessionGCST002594