SNP Detail For rs11653176
1.Mapping Information
Human SNP ID rs11653176
Human chromosome chr17
Human SNP position 61370008
Pig chromosome chr12
Pig SNP position 38368659
2.Annotation Information
PubMed ID25967671
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/25967671
StudyGenome-wide association analysis identifies three new risk loci for gout arthritis in Han Chinese.
Disease/TraitGout
Initial sample1,255 Han Chinese ancestry male cases, 1,848 Han Chinese ancestry male controls
Replication sample3,020 Han Chinese ancestry male cases, 4,424 Han Chinese ancestry male controls
Region17q23.2
Chromosome idchr17
Chromosome position61370008
Reported geneBCAS3
Mapped geneLOC101927855, BCAS3
Upstream gene id
Downstream gene id
SNP gene ids101927855, 54828
Upstream gene distance
Downstream gene distance
SNP risk allelers11653176-?
SNPsrs11653176
Merged0
SNP id current11653176
Contextintron_variant
Intergenic0
Allele frequency0.528
P value0.0000000000001
Pvalue mlog13
P value text
Or beta1.27
%95 Ci[NR]
PlatformAffymetrix [603505]
CNVN
Mapped traitgout
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004274
Study accessionGCST002909