SNP Detail For rs11651708
1.Mapping Information
Human SNP ID rs11651708
Human chromosome chr17
Human SNP position 66521195
Pig chromosome chr12
Pig SNP position 13408822
2.Annotation Information
PubMed ID23870195
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23870195
StudyGenetics of coronary artery calcification among African Americans, a meta-analysis.
Disease/TraitCoronary artery calcification
Initial sample5,823 African American individuals
Replication sample9,992 European ancestry individuals
Region17q24.2
Chromosome idchr17
Chromosome position66521195
Reported genePRKCA
Mapped genePRKCA
Upstream gene id
Downstream gene id
SNP gene ids5578
Upstream gene distance
Downstream gene distance
SNP risk allelers11651708-A
SNPsrs11651708
Merged0
SNP id current11651708
Contextintron_variant
Intergenic0
Allele frequency0.33
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.16
%95 Ci[0.1-0.22] unit decrease
PlatformAffymetrix, Illumina [up to 2727966] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST002097