SNP Detail For rs1165152
1.Mapping Information
Human SNP ID rs1165152
Human chromosome chr6
Human SNP position 25818538
Pig chromosome chr7
Pig SNP position 21871584
2.Annotation Information
PubMed ID25811787
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25811787
StudyModulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans.
Disease/TraitUrate levels in overweight individuals
Initial sampleup to 10,058 European ancestry male individuals, up to 7,189 European ancestry female individuals
Replication sampleNA
Region6p22.2
Chromosome idchr6
Chromosome position25818538
Reported geneSLC17A1, SLC17A4, SLC17A3
Mapped geneSLC17A1
Upstream gene id
Downstream gene id
SNP gene ids6568
Upstream gene distance
Downstream gene distance
SNP risk allelers1165152-G
SNPsrs1165152
Merged0
SNP id current1165152
Contextintron_variant
Intergenic0
Allele frequency0.54
P value0.0000001
Pvalue mlog7
P value text(women)
Or beta0.088
%95 Ci[0.055-0.121] kg/m2 increase
PlatformAffymetrix, Illumina [at least 188473] (imputed)
CNVN
Mapped traiturate measurement, overweight body mass index status
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005935
Study accessionGCST002829