SNP Detail For rs11650066
1.Mapping Information
Human SNP ID rs11650066
Human chromosome chr17
Human SNP position 33960430
Pig chromosome chr12
Pig SNP position 42827025
2.Annotation Information
PubMed ID21378988
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21378988
StudyA genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease.
Disease/TraitCoronary heart disease
Initial sample8,424 European ancestry cases, 7,268 European ancestry controls, 6,996 South Asian ancestry cases, 7,794 South Asian ancestry controls
Replication sample18,049 European ancestry cases, 16,357 European ancestry controls, 3,359 South Asian ancestry cases, 2,828 South Asian ancestry controls
Region17q12
Chromosome idchr17
Chromosome position33960430
Reported geneintergenic
Mapped geneASIC2
Upstream gene id
Downstream gene id
SNP gene ids40
Upstream gene distance
Downstream gene distance
SNP risk allelers11650066-?
SNPsrs11650066
Merged0
SNP id current11650066
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta
%95 Ci
PlatformIllumina [574919]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000999