SNP Detail For rs11647589
1.Mapping Information
Human SNP ID rs11647589
Human chromosome chr16
Human SNP position 20438294
Pig chromosome chr3
Pig SNP position 26176559
2.Annotation Information
PubMed ID24816252
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24816252
StudyAn atlas of genetic influences on human blood metabolites.
Disease/TraitBlood metabolite levels
Initial sample7,824 European ancestry individuals
Replication sampleNA
Region16p12.3
Chromosome idchr16
Chromosome position20438294
Reported geneACSM5
Mapped geneACSM5
Upstream gene id
Downstream gene id
SNP gene ids54988
Upstream gene distance
Downstream gene distance
SNP risk allelers11647589-A
SNPsrs11647589
Merged0
SNP id current11647589
Contextintron_variant
Intergenic0
Allele frequency0.72
P value0.00000000003
Pvalue mlog10.5228787452803
P value text(3-phenylpropionate (hydrocinnamate))
Or beta0.03
%95 Ci[0.02-0.04] unit increase
PlatformAffymetrix, Illumina [2100000] (imputed)
CNVN
Mapped traitblood metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005664
Study accessionGCST002443