Human SNP ID | rs11647589 |
---|---|
Human chromosome | chr16 |
Human SNP position | 20438294 |
Pig chromosome | chr3 |
Pig SNP position | 26176559 |
PubMed ID | 24816252 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24816252 |
Study | An atlas of genetic influences on human blood metabolites. |
Disease/Trait | Blood metabolite levels |
Initial sample | 7,824 European ancestry individuals |
Replication sample | NA |
Region | 16p12.3 |
Chromosome id | chr16 |
Chromosome position | 20438294 |
Reported gene | ACSM5 |
Mapped gene | ACSM5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54988 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11647589-A |
SNPs | rs11647589 |
Merged | 0 |
SNP id current | 11647589 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.72 |
P value | 0.00000000003 |
Pvalue mlog | 10.5228787452803 |
P value text | (3-phenylpropionate (hydrocinnamate)) |
Or beta | 0.03 |
%95 Ci | [0.02-0.04] unit increase |
Platform | Affymetrix, Illumina [2100000] (imputed) |
CNV | N |
Mapped trait | blood metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005664 |
Study accession | GCST002443 |