SNP Detail For rs11646213
1.Mapping Information
Human SNP ID rs11646213
Human chromosome chr16
Human SNP position 82609046
Pig chromosome chr6
Pig SNP position 6374694
2.Annotation Information
PubMed ID19304780
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19304780
StudyGenome-wide scan identifies CDH13 as a novel susceptibility locus contributing to blood pressure determination in two European populations.
Disease/TraitHypertension
Initial sample364 European ancestry cases, 590 European ancestry controls
Replication sample1,043 European ancestry cases, 1,769 European ancestry controls
Region16q23.3
Chromosome idchr16
Chromosome position82609046
Reported geneCDH13
Mapped geneLOC101928392 - CDH13
Upstream gene id101928392
Downstream gene id1012
SNP gene ids
Upstream gene distance33585
Downstream gene distance17748
SNP risk allelers11646213-T
SNPsrs11646213
Merged0
SNP id current11646213
Contextintergenic_variant
Intergenic1
Allele frequency0.6
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.28
%95 Ci[1.15-1.43]
PlatformAffymetrix [395912]
CNVN
Mapped traithypertension
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000537
Study accessionGCST000361