Human SNP ID | rs11646213 |
---|---|
Human chromosome | chr16 |
Human SNP position | 82609046 |
Pig chromosome | chr6 |
Pig SNP position | 6374694 |
PubMed ID | 19304780 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19304780 |
Study | Genome-wide scan identifies CDH13 as a novel susceptibility locus contributing to blood pressure determination in two European populations. |
Disease/Trait | Hypertension |
Initial sample | 364 European ancestry cases, 590 European ancestry controls |
Replication sample | 1,043 European ancestry cases, 1,769 European ancestry controls |
Region | 16q23.3 |
Chromosome id | chr16 |
Chromosome position | 82609046 |
Reported gene | CDH13 |
Mapped gene | LOC101928392 - CDH13 |
Upstream gene id | 101928392 |
Downstream gene id | 1012 |
SNP gene ids | |
Upstream gene distance | 33585 |
Downstream gene distance | 17748 |
SNP risk allele | rs11646213-T |
SNPs | rs11646213 |
Merged | 0 |
SNP id current | 11646213 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.6 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.28 |
%95 Ci | [1.15-1.43] |
Platform | Affymetrix [395912] |
CNV | N |
Mapped trait | hypertension |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000537 |
Study accession | GCST000361 |