Human SNP ID | rs116446171 |
---|---|
Human chromosome | chr6 |
Human SNP position | 484453 |
Pig chromosome | chr7 |
Pig SNP position | 47662 |
PubMed ID | 25261932 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25261932 |
Study | Genome-wide association study identifies multiple susceptibility loci for diffuse large B cell lymphoma. |
Disease/Trait | Diffuse large B cell lymphoma |
Initial sample | 3,857 European ancestry cases, 7,666 European ancestry controls |
Replication sample | 1,359 European ancestry cases, 4,557 European ancestry controls |
Region | 6p25.3 |
Chromosome id | chr6 |
Chromosome position | 484453 |
Reported gene | EXOC2 |
Mapped gene | LOC105374875 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105374875 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs116446171-G |
SNPs | rs116446171 |
Merged | 0 |
SNP id current | 116446171 |
Context | downstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.019 |
P value | 2E-21 |
Pvalue mlog | 20.698970004336 |
P value text | |
Or beta | 2.2 |
%95 Ci | [1.87-2.59] |
Platform | Illumina [8363971] (imputed) |
CNV | N |
Mapped trait | diffuse large B-cell lymphoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000403 |
Study accession | GCST002636 |