SNP Detail For rs11635085
1.Mapping Information
Human SNP ID rs11635085
Human chromosome chr15
Human SNP position 92503406
Pig chromosome chr7
Pig SNP position 92358762
2.Annotation Information
PubMed ID24962563
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/24962563
StudyGenome-wide genetic and transcriptomic investigation of variation in antibody response to dietary antigens.
Disease/TraitFood antigen IgG levels
Initial sample1,367 Mexican Americans from 63 families
Replication sampleNA
Region15q26.1
Chromosome idchr15
Chromosome position92503406
Reported geneC15orf32
Mapped geneC15orf32 - LINC00930
Upstream gene id145858
Downstream gene id100144604
SNP gene ids
Upstream gene distance2289
Downstream gene distance64412
SNP risk allelers11635085-G
SNPsrs11635085
Merged0
SNP id current11635085
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.107
P value0.0000006
Pvalue mlog6.22184874961635
P value text(Casein)
Or beta0.3
%95 Ci[NR] unit decrease
PlatformIllumina [944565] (imputed)
CNVN
Mapped traitserum IgG measurement, response to dietary antigen
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004565, http://www.ebi.ac.uk/efo/EFO_0005844
Study accessionGCST002518