Human SNP ID | rs11635085 |
---|---|
Human chromosome | chr15 |
Human SNP position | 92503406 |
Pig chromosome | chr7 |
Pig SNP position | 92358762 |
PubMed ID | 24962563 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/24962563 |
Study | Genome-wide genetic and transcriptomic investigation of variation in antibody response to dietary antigens. |
Disease/Trait | Food antigen IgG levels |
Initial sample | 1,367 Mexican Americans from 63 families |
Replication sample | NA |
Region | 15q26.1 |
Chromosome id | chr15 |
Chromosome position | 92503406 |
Reported gene | C15orf32 |
Mapped gene | C15orf32 - LINC00930 |
Upstream gene id | 145858 |
Downstream gene id | 100144604 |
SNP gene ids | |
Upstream gene distance | 2289 |
Downstream gene distance | 64412 |
SNP risk allele | rs11635085-G |
SNPs | rs11635085 |
Merged | 0 |
SNP id current | 11635085 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.107 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | (Casein) |
Or beta | 0.3 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [944565] (imputed) |
CNV | N |
Mapped trait | serum IgG measurement, response to dietary antigen |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004565, http://www.ebi.ac.uk/efo/EFO_0005844 |
Study accession | GCST002518 |