SNP Detail For rs116317518
1.Mapping Information
Human SNP ID rs116317518
Human chromosome chr3
Human SNP position 22154829
Pig chromosome chr13
Pig SNP position 10236051
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1 in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region3p24.3
Chromosome idchr3
Chromosome position22154829
Reported geneZNF385D
Mapped geneZNF385D
Upstream gene id
Downstream gene id
SNP gene ids79750
Upstream gene distance
Downstream gene distance
SNP risk allelers116317518-T
SNPsrs116317518
Merged0
SNP id current116317518
Contextintron_variant
Intergenic0
Allele frequency0.959
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.14
%95 CiNR unit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST003263