Human SNP ID | rs11622475 |
---|---|
Human chromosome | chr14 |
Human SNP position | 104042739 |
Pig chromosome | chr7 |
Pig SNP position | 131119626 |
PubMed ID | 17554300 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/17554300 |
Study | Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. |
Disease/Trait | Bipolar disorder |
Initial sample | 1,868 European ancestry cases, 2,938 European ancestry controls |
Replication sample | NA |
Region | 14q32.33 |
Chromosome id | chr14 |
Chromosome position | 104042739 |
Reported gene | NR |
Mapped gene | TDRD9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 122402 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11622475-C |
SNPs | rs11622475 |
Merged | 0 |
SNP id current | 11622475 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.7 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.13 |
%95 Ci | [0.89-1.44] |
Platform | Affymetrix [469557] |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST000044 |
PubMed ID | 21254220 |
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/21254220 |
Study | Propensity score-based nonparametric test revealing genetic variants underlying bipolar disorder. |
Disease/Trait | Bipolar disorder |
Initial sample | 1,868 European ancestry cases, 2,938 European ancestry controls |
Replication sample | NA |
Region | 14q32.33 |
Chromosome id | chr14 |
Chromosome position | 104042739 |
Reported gene | NR |
Mapped gene | TDRD9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 122402 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11622475-? |
SNPs | rs11622475 |
Merged | 0 |
SNP id current | 11622475 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (addtive) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [NR] |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST000961 |