SNP Detail For rs11617058
1.Mapping Information
Human SNP ID rs11617058
Human chromosome chr13
Human SNP position 84718977
Pig chromosome chr11
Pig SNP position 61012376
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region13q31.1
Chromosome idchr13
Chromosome position84718977
Reported geneNR
Mapped geneLOC387939 - LOC105370290
Upstream gene id387939
Downstream gene id105370290
SNP gene ids
Upstream gene distance107348
Downstream gene distance153122
SNP risk allelers11617058-T
SNPsrs11617058
Merged
SNP id current11617058
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta1.07
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048