SNP Detail For rs11615274
1.Mapping Information
Human SNP ID rs11615274
Human chromosome chr12
Human SNP position 73207352
Pig chromosome chr5
Pig SNP position 39888223
2.Annotation Information
PubMed ID22417934
JournalPsychiatry Res
Linkwww.ncbi.nlm.nih.gov/pubmed/22417934
StudyGenome-wide association study identifies genetic loci associated with body mass index and high density lipoprotein-cholesterol levels during psychopharmacological treatment - a cross-sectional naturalistic study.
Disease/TraitBody mass index and cholesterol (psychopharmacological treatment)
Initial sample283 European ancestry schizophrenia cases, 213 European ancestry bipolar disorder cases, 98 European ancestry psychosis cases
Replication sampleNA
Region12q21.1
Chromosome idchr12
Chromosome position73207352
Reported geneintergenic
Mapped geneLOC101928137
Upstream gene id
Downstream gene id
SNP gene ids101928137
Upstream gene distance
Downstream gene distance
SNP risk allelers11615274-?
SNPsrs11615274
Merged0
SNP id current11615274
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000009
Pvalue mlog7.04575749056067
P value text(HDL-C)
Or beta
%95 Ci[NR]
PlatformAffymetrix [608239]
CNVN
Mapped traittotal cholesterol measurement, response to drug
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004574, http://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001440