Human SNP ID | rs11615274 |
---|---|
Human chromosome | chr12 |
Human SNP position | 73207352 |
Pig chromosome | chr5 |
Pig SNP position | 39888223 |
PubMed ID | 22417934 |
---|---|
Journal | Psychiatry Res |
Link | www.ncbi.nlm.nih.gov/pubmed/22417934 |
Study | Genome-wide association study identifies genetic loci associated with body mass index and high density lipoprotein-cholesterol levels during psychopharmacological treatment - a cross-sectional naturalistic study. |
Disease/Trait | Body mass index and cholesterol (psychopharmacological treatment) |
Initial sample | 283 European ancestry schizophrenia cases, 213 European ancestry bipolar disorder cases, 98 European ancestry psychosis cases |
Replication sample | NA |
Region | 12q21.1 |
Chromosome id | chr12 |
Chromosome position | 73207352 |
Reported gene | intergenic |
Mapped gene | LOC101928137 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101928137 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11615274-? |
SNPs | rs11615274 |
Merged | 0 |
SNP id current | 11615274 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000009 |
Pvalue mlog | 7.04575749056067 |
P value text | (HDL-C) |
Or beta | |
%95 Ci | [NR] |
Platform | Affymetrix [608239] |
CNV | N |
Mapped trait | total cholesterol measurement, response to drug |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004574, http://purl.obolibrary.org/obo/GO_0042493 |
Study accession | GCST001440 |