SNP Detail For rs116135467
1.Mapping Information
Human SNP ID rs116135467
Human chromosome chr2
Human SNP position 218877731
Pig chromosome chr15
Pig SNP position 133979165
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region2q35
Chromosome idchr2
Chromosome position218877731
Reported geneIntergenic
Mapped geneWNT10A
Upstream gene id
Downstream gene id
SNP gene ids80326
Upstream gene distance
Downstream gene distance
SNP risk allelers116135467-G
SNPsrs116135467
Merged0
SNP id current116135467
Contextupstream_gene_variant
Intergenic0
Allele frequency0.993
P value0.0000007
Pvalue mlog6.15490195998574
P value text(AA)
Or beta0.242
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265