SNP Detail For rs11613331
1.Mapping Information
Human SNP ID rs11613331
Human chromosome chr12
Human SNP position 242301
Pig chromosome chr5
Pig SNP position 69884313
2.Annotation Information
PubMed ID24816252
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24816252
StudyAn atlas of genetic influences on human blood metabolites.
Disease/TraitBlood metabolite levels
Initial sample7,824 European ancestry individuals
Replication sampleNA
Region12p13.33
Chromosome idchr12
Chromosome position242301
Reported geneSLC6A13
Mapped geneSLC6A13
Upstream gene id
Downstream gene id
SNP gene ids6540
Upstream gene distance
Downstream gene distance
SNP risk allelers11613331-A
SNPsrs11613331
Merged0
SNP id current11613331
Contextintron_variant
Intergenic0
Allele frequency0.55
P value2E-25
Pvalue mlog24.698970004336
P value text(pyroglutamine)
Or beta0.037
%95 Ci[0.029-0.045] unit increase
PlatformAffymetrix, Illumina [2100000] (imputed)
CNVN
Mapped traitblood metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005664
Study accessionGCST002443