SNP Detail For rs11612228
1.Mapping Information
Human SNP ID rs11612228
Human chromosome chr12
Human SNP position 467818
Pig chromosome chr5
Pig SNP position 69989423
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region12p13.33
Chromosome idchr12
Chromosome position467818
Reported geneB4GALNT3
Mapped geneB4GALNT3
Upstream gene id
Downstream gene id
SNP gene ids283358
Upstream gene distance
Downstream gene distance
SNP risk allelers11612228-T
SNPsrs11612228
Merged0
SNP id current11612228
Contextintron_variant
Intergenic0
Allele frequency0.378
P value0.0000000007
Pvalue mlog9.15490195998574
P value text
Or beta0.02
%95 Ci[0.014-0.026] unit increase
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647