SNP Detail For rs11602337
1.Mapping Information
Human SNP ID rs11602337
Human chromosome chr11
Human SNP position 25092235
Pig chromosome chr2
Pig SNP position 36947725
2.Annotation Information
PubMed ID25188341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25188341
StudyGenome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias.
Disease/TraitVascular brain injury
Initial sampleup to 2,940 individuals
Replication sampleNA
Region11p14.3
Chromosome idchr11
Chromosome position25092235
Reported geneintergenic
Mapped geneLUZP2 - LOC105376596
Upstream gene id338645
Downstream gene id105376596
SNP gene ids
Upstream gene distance9595
Downstream gene distance642551
SNP risk allelers11602337-T
SNPsrs11602337
Merged0
SNP id current11602337
Contextintergenic_variant
Intergenic1
Allele frequency0.2923
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.2943
%95 Ci[0.16-0.42] unit decrease
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitvascular brain injury measurement, vascular brain injury
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006800, http://www.ebi.ac.uk/efo/EFO_0006791
Study accessionGCST002590