SNP Detail For rs1158867
1.Mapping Information
Human SNP ID rs1158867
Human chromosome chr2
Human SNP position 127419801
Pig chromosome chr15
Pig SNP position 28734457
2.Annotation Information
PubMed ID20802025
JournalBlood
Linkwww.ncbi.nlm.nih.gov/pubmed/20802025
StudyGenome-wide association study identifies novel loci for plasma levels of protein C: the ARIC study.
Disease/TraitProtein C levels
Initial sample8,048 European ancestry individuals
Replication sample1,376 European ancestry individuals
Region2q14.3
Chromosome idchr2
Chromosome position127419801
Reported genePROC
Mapped genePROC
Upstream gene id
Downstream gene id
SNP gene ids5624
Upstream gene distance
Downstream gene distance
SNP risk allelers1158867-C
SNPsrs1158867
Merged0
SNP id current1158867
Contextsplice_region_variant
Intergenic0
Allele frequency0.42
P value4E-36
Pvalue mlog35.397940008672
P value text
Or beta0.12
%95 Ci[0.10-0.14] ug/ml decrease
PlatformAffymetrix [2461269]
CNVN
Mapped traitprotein C measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004633
Study accessionGCST000780