SNP Detail For rs11582609
1.Mapping Information
Human SNP ID rs11582609
Human chromosome chr1
Human SNP position 82754973
Pig chromosome chr6
Pig SNP position 121353513
2.Annotation Information
PubMed ID26305897
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26305897
StudyGenome-Wide Association and Trans-ethnic Meta-Analysis for Advanced Diabetic Kidney Disease: Family Investigation of Nephropathy and Diabetes (FIND).
Disease/TraitDiabetic kidney disease
Initial sample1,564 African American cases, 369 African American diabetic controls, 1,288 African American non-diabetic controls, 538 American Indian ancestry cases, 319 American Indian ancestry diabetic controls, 342 European ancestry cases, 404 European ancestry dia
Replication sample950 African American cases, 50 African American diabetic controls, 1,887 African American non-diabetic controls, 471 American Indian ancestry cases, 340 American Indian ancestry diabetic controls, 486 American Indian ancestry non-diabetic controls, 582 Eu
Region1p31.1
Chromosome idchr1
Chromosome position82754973
Reported geneintergenic
Mapped geneLOC105378814 - LOC105378815
Upstream gene id105378814
Downstream gene id105378815
SNP gene ids
Upstream gene distance98695
Downstream gene distance59150
SNP risk allelers11582609-?
SNPsrs11582609
Merged
SNP id current11582609
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text(dominant )
Or beta1.2345679
%95 Ci
PlatformAffymetrix [NR]
CNVN
Mapped traitdiabetic nephropathy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000401
Study accessionGCST003098