Human SNP ID | rs11577354 |
---|---|
Human chromosome | chr1 |
Human SNP position | 235103812 |
Pig chromosome | chr14 |
Pig SNP position | 60245478 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 1q42.3 |
Chromosome id | chr1 |
Chromosome position | 235103812 |
Reported gene | TOMM20 |
Mapped gene | LINC01348 - TOMM20 |
Upstream gene id | 731656 |
Downstream gene id | 9804 |
SNP gene ids | |
Upstream gene distance | 33994 |
Downstream gene distance | 5529 |
SNP risk allele | rs11577354-G |
SNPs | rs11577354 |
Merged | 0 |
SNP id current | 11577354 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.445 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (RQmax) |
Or beta | 0.04 |
%95 Ci | [NR] increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | respiratory quotient |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005189 |
Study accession | GCST001762 |