Human SNP ID | rs11572061 |
---|---|
Human chromosome | chr6 |
Human SNP position | 44448340 |
Pig chromosome | chr7 |
Pig SNP position | 45351132 |
PubMed ID | 26089329 |
---|---|
Journal | Stroke |
Link | www.ncbi.nlm.nih.gov/pubmed/26089329 |
Study | Meta-Analysis of Genome-Wide Association Studies Identifies Genetic Risk Factors for Stroke in African Americans. |
Disease/Trait | Ischemic stroke |
Initial sample | up to 1,365 African American cases, up to 13,154 African American controls |
Replication sample | European ancestry individuals (see Traylor, 2012) |
Region | 6p21.1 |
Chromosome id | chr6 |
Chromosome position | 44448340 |
Reported gene | CDC5L |
Mapped gene | CDC5L |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 988 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11572061-A |
SNPs | rs11572061 |
Merged | |
SNP id current | 11572061 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.97 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (AA) |
Or beta | 0.59 |
%95 Ci | [0.35-0.83] unit decrease |
Platform | Affymetrix, Illumina [~ 2600000] (imputed) |
CNV | N |
Mapped trait | Ischemic stroke |
Mapped trait URI | http://purl.obolibrary.org/obo/HP_0002140 |
Study accession | GCST002988 |