SNP Detail For rs115559601
1.Mapping Information
Human SNP ID rs115559601
Human chromosome chr5
Human SNP position 67223330
Pig chromosome chr16
Pig SNP position 49189874
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region5q12.3
Chromosome idchr5
Chromosome position67223330
Reported geneIntergenic
Mapped geneCD180 - LOC101928819
Upstream gene id4064
Downstream gene id101928819
SNP gene ids
Upstream gene distance26541
Downstream gene distance237315
SNP risk allelers115559601-T
SNPsrs115559601
Merged0
SNP id current115559601
Contextintergenic_variant
Intergenic1
Allele frequency0.993
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.102
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264