SNP Detail For rs11551002
1.Mapping Information
Human SNP ID rs11551002
Human chromosome chr19
Human SNP position 35871260
Pig chromosome chr6
Pig SNP position 40671542
2.Annotation Information
PubMed ID26379185
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26379185
StudyNo Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity.
Disease/TraitSevere influenza A (H1N1) infection
Initial sample49 European ancestry severe cases, 549 European ancestry population controls
Replication sampleNA
Region19q13.12
Chromosome idchr19
Chromosome position35871260
Reported geneAPLP1
Mapped geneAPLP1
Upstream gene id
Downstream gene id
SNP gene ids333
Upstream gene distance
Downstream gene distance
SNP risk allelers11551002-?
SNPsrs11551002
Merged
SNP id current11551002
Contextmissense_variant
Intergenic0
Allele frequency0
P value0.0000000000002
Pvalue mlog12.698970004336
P value text
Or beta
%95 Ci
PlatformAffymetrix [547296]
CNVN
Mapped traitinfluenza A (H1N1)
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_1001488
Study accessionGCST003123