Human SNP ID | rs115329265 |
---|---|
Human chromosome | chr6 |
Human SNP position | 28744470 |
Pig chromosome | chr7 |
Pig SNP position | 24373749 |
PubMed ID | 25056061 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25056061 |
Study | Biological insights from 108 schizophrenia-associated genetic loci. |
Disease/Trait | Schizophrenia |
Initial sample | 32,405 European ancestry cases, 42,221 European ancestry controls, 1,235 European ancestry cases and 1,235 European ancestry controls from 1235 parent-offspring trios, 1,836 East Asian ancestry cases, 3,383 East Asian ancestry controls |
Replication sample | 1,513 European ancestry cases, 66,236 European ancestry controls |
Region | 6p22.1 |
Chromosome id | chr6 |
Chromosome position | 28744470 |
Reported gene | intergenic |
Mapped gene | TRR-CCG1-2 - TRK-TTT7-1 |
Upstream gene id | 100189365 |
Downstream gene id | 100189332 |
SNP gene ids | |
Upstream gene distance | 1446 |
Downstream gene distance | 3274 |
SNP risk allele | rs115329265-A |
SNPs | rs115329265 |
Merged | 1 |
SNP id current | 115329265 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.85 |
P value | 3E-31 |
Pvalue mlog | 30.5228787452803 |
P value text | |
Or beta | 1.205 |
%95 Ci | [1.168-1.244] |
Platform | Affymetrix, Illumina [9005918] (imputed) |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST002539 |