Human SNP ID | rs1152846 |
---|---|
Human chromosome | chr3 |
Human SNP position | 188703109 |
Pig chromosome | chr13 |
Pig SNP position | 135475322 |
PubMed ID | 19851299 |
---|---|
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/19851299 |
Study | Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene. |
Disease/Trait | Weight |
Initial sample | Up to 3,925 European individuals |
Replication sample | NA |
Region | 3q28 |
Chromosome id | chr3 |
Chromosome position | 188703109 |
Reported gene | NR |
Mapped gene | LPP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4026 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1152846-G |
SNPs | rs1152846 |
Merged | 0 |
SNP id current | 1152846 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.77 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (females + males) |
Or beta | 1.7 |
%95 Ci | [NR] kg decrease |
Platform | Illumina [318237] |
CNV | N |
Mapped trait | body weight |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004338 |
Study accession | GCST000511 |
PubMed ID | 19851299 |
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/19851299 |
Study | Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene. |
Disease/Trait | Body mass index |
Initial sample | 1,079 South Tyrolian individuals, 790 Dutch founder individuals, 2,060 European ancestry individuals |
Replication sample | NA |
Region | 3q28 |
Chromosome id | chr3 |
Chromosome position | 188703109 |
Reported gene | NR |
Mapped gene | LPP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4026 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1152846-G |
SNPs | rs1152846 |
Merged | 0 |
SNP id current | 1152846 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.77 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (females +males) |
Or beta | 0.09 |
%95 Ci | [NR] kg decrease |
Platform | Illumina [318237] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST000512 |