SNP Detail For rs115249811
1.Mapping Information
Human SNP ID rs115249811
Human chromosome chr2
Human SNP position 50699981
Pig chromosome chr3
Pig SNP position 95845288
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region2p16.3
Chromosome idchr2
Chromosome position50699981
Reported geneNRXN1
Mapped geneNRXN1
Upstream gene id
Downstream gene id
SNP gene ids9378
Upstream gene distance
Downstream gene distance
SNP risk allelers115249811-C
SNPsrs115249811
Merged0
SNP id current115249811
Contextintron_variant
Intergenic0
Allele frequency1
P value0.0000002
Pvalue mlog6.69897000433601
P value text(AA)
Or beta0.834
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264