SNP Detail For rs1150561
1.Mapping Information
Human SNP ID rs1150561
Human chromosome chr6
Human SNP position 10963614
Pig chromosome chr7
Pig SNP position 7966225
2.Annotation Information
PubMed ID25811787
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25811787
StudyModulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans.
Disease/TraitUrate levels in lean individuals
Initial sampleup to 5,529 European ancestry male individuals, up to 9,753 European ancestry female individuals
Replication sampleNA
Region6p24.2
Chromosome idchr6
Chromosome position10963614
Reported geneSYCP2L
Mapped geneSYCP2L
Upstream gene id
Downstream gene id
SNP gene ids221711
Upstream gene distance
Downstream gene distance
SNP risk allelers1150561-G
SNPsrs1150561
Merged0
SNP id current1150561
Contextintron_variant
Intergenic0
Allele frequency0.94
P value0.000008
Pvalue mlog5.09691001300805
P value text(women)
Or beta0.175
%95 Ci[0.099-0.251] kg/m2 decrease
PlatformAffymetrix, Illumina [at least 188473] (imputed)
CNVN
Mapped traiturate measurement, underweight body mass index status
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005936
Study accessionGCST002830